Aspartate-β-semialdeyhyde dehydrogenase as a potential therapeutic target of Mycobacterium tuberculosis H37Rv: Evidence from in silico elementary mode analysis of biological network model

  • Saif Khan
  • , Pallavi Somvanshi
  • , Tulika Bhardwaj
  • , Raju K. Mandal
  • , Sajad A. Dar
  • , Mohd Wahid
  • , Arshad Jawed
  • , Mohtashim Lohani
  • , Mahvish Khan
  • , Mohammed Y. Areeshi
  • , Shafiul Haque

Research output: Contribution to journalArticlepeer-review

18 Scopus citations

Abstract

The emergence of multi-drug resistant strains and co-occurrence of tuberculosis with HIV creates a major burden to the human health globally. Failure of primary antibacterial therapy necessitates the identification of new mycobacterial drugs. In this study, a comprehensive analysis involving bottom-up systems biology approach was applied wherein we have identified potential therapeutic targets of Mycobacterium tuberculosis infections. Our study prioritized M. tuberculosis therapeutic targets (aspartate-β-semialdeyhde dehydrogenase [ASD], dihydrodipicolinate reductase and diaminopimelate decarboxylase) based on flux and elementary mode analysis using direct mathematical modeling of the relevant metabolic pathways. Molecular docking and simulation studies of the priority target (ie, ASD) revealed the therapeutic potential of the selected natural products (Huperzine A, Rosmarinic acid, and Curcumin) based ASD inhibitors. The study highlights the crucial role of systems biology in conjunction with molecular interaction (docking) for probing novel leads against an increasingly resistant pathogen, M. tuberculousis.

Original languageEnglish
Pages (from-to)2832-2842
Number of pages11
JournalJournal of Cellular Biochemistry
Volume119
Issue number3
DOIs
StatePublished - Mar 2018
Externally publishedYes

Keywords

  • elementary mode analysis
  • essential genes
  • mathematical modeling
  • molecular docking and simulation
  • orthologous

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